BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB023D01LP1|AL428034
(973 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig501 1270 0.0
>3x_Contig501
Length = 2416
Score = 1270 bits (631), Expect = 0.0
Identities = 766/806 (95%), Gaps = 15/806 (1%)
Strand = Plus / Minus
Query: 168 gtwagtgcttstatyctattaggaggtgctgctgtcatcacacgcyatcacgtgggatga 227
|| ||||||| ||| ||||||||||||||||||||||||| |||| ||||| ||||||||
Sbjct: 1335 gttagtgcttgtattctattaggaggtgctgctgtcatca-acgctatcac-tgggatga 1278
Query: 228 atacttatgctgcgttgtatttattacctttggtgtgtgccaytkacgtgtatatcggtg 287
|||||||||||||||||||||||||||||||||||||||||| | |||||||| ||||||
Sbjct: 1277 atacttatgctgcgttgtatttattacctttggtgtgtgccatttacgtgtatttcggtg 1218
Query: 288 gtctgaagagctaccttcatcgtctgakgccttgcatactttcccattgttggtgttttt 347
|||| |||||||||||||||| ||||| ||||||||||||||||||||||||||||||||
Sbjct: 1217 gtct-aagagctaccttcatc-tctgatgccttgcatactttcccattgttggtgttttt 1160
Query: 348 gatcatcttctgtatttgtcatttatggtggtggttccagtatcattgcggtctccaggt 407
||||||||| |||||||||||||||||||||||||||||||||||||| |||||||||||
Sbjct: 1159 gatcatctt-tgtatttgtcatttatggtggtggttccagtatcattg-ggtctccaggt 1102
Query: 408 aagcacgtgggatcttctaaccgaagtggcyaataagaatccggtctcagataattatca 467
||| | |||||||||||||||||||||||| |||||||||||||||||||||||||||||
Sbjct: 1101 aag-atgtgggatcttctaaccgaagtggctaataagaatccggtctcagataattatca 1043
Query: 468 cggttcctttttaacttycagatccaaagatggtggkatcttccycgttcattyactcat 527
||||||||||||||||| |||||||||||||||||| ||||||| ||||||| | ||
Sbjct: 1042 cggttcctttttaactttcagatccaaagatggtggtatcttcct-gttcatttcc--at 986
Query: 528 tatcactagggtttgggcttgtcgtcctagaycaagcttattggycaagagccactgctg 587
||||||| |||||||||||||| |||||||| |||||||||||| ||||||||| |||||
Sbjct: 985 tatcact-gggtttgggcttgttgtcctagatcaagcttattggtcaagagccattgctg 927
Query: 588 gcccaacctctcgagagacctcaaaggcttgatttcatcggtgccgtgtcctggttcgtt 647
|||||||||| || ||||||||||||||| |||||||||||||||||||||||||||||
Sbjct: 926 -cccaacctct-ga-agacctcaaaggctt-atttcatcggtgccgtgtcctggttcgtt 871
Query: 648 atcccatggactatgggtctatgtktgggtttagcagccagagccacctcgattttacct 707
|||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||
Sbjct: 870 atcccatggactatgggtctatgtttgggtttagcagccagagccacctcgattttacct 811
Query: 708 ggrttcccaccattgagtgattctgaaatttcttctggtttatcagcwgtggcaggtgcc 767
|| |||||||||||||||||||||||||||||||||||||||||||| ||||||||||||
Sbjct: 810 ggattcccaccattgagtgattctgaaatttcttctggtttatcagctgtggcaggtgcc 751
Query: 768 tctcaccttgtcggccatgcaggtactggtatgattctactcatgatctttttgtcagtg 827
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 750 tctcaccttgtcggccatgcaggtactggtatgattctactcatgatctttttgtcagtg 691
Query: 828 acttcctcattctctggtgagttgatcgstacttcaactttgctatcttacgaygtttac 887
|||||||||||||||||||||||||||| |||||||||||||||||||||||| ||||||
Sbjct: 690 acttcctcattctctggtgagttgatcgctacttcaactttgctatcttacgatgtttac 631
Query: 888 aagaaatacattaagcaaaacgctactcctcatgaagttttgctagtctctaagatcggt 947
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 630 aagaaatacattaagcaaaacgctactcctcatgaagttttgctagtctctaagatcggt 571
Query: 948 gtctttttctgggccatctttgcygg 973
||||||||||||||||||||||| ||
Sbjct: 570 gtctttttctgggccatctttgctgg 545
Score = 117 bits (58), Expect = 5e-26
Identities = 88/95 (92%), Gaps = 4/95 (4%)
Strand = Plus / Minus
Query: 1 gatccaagtgtcagacttcagtatagttgcgtcaaaacgttaaggcaaatgcaaacttgg 60
|||||||||||||| |||||||||||||||||||||| ||||||||||||||||||||||
Sbjct: 1483 gatccaagtgtcagtcttcagtatagttgcgtcaaaa-gttaaggcaaatgcaaacttgg 1425
Query: 61 ttactacgtgtgtcctgcaagctggktatttgaga 95
||||||| || ||||| ||||||| |||||||||
Sbjct: 1424 ttactac--gtttcctg-aagctggttatttgaga 1393
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.39 0.714 1.32
Gapped
Lambda K H
1.39 0.714 1.32
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 4614
Number of Sequences: 1807
Number of extensions: 4614
Number of successful extensions: 40
Number of sequences better than 1.0e-20: 1
length of query: 973
length of database: 10,358,551
effective HSP length: 16
effective length of query: 957
effective length of database: 10,329,639
effective search space: 9885464523
effective search space used: 9885464523
T: 0
A: 40
X1: 5 (10.1 bits)
X2: 14 (28.2 bits)
S1: 12 (24.6 bits)
S2: 50 (101.1 bits)